Alphabetical Index: G

A B C D E F G H I K L M N O P R S T U V W X Y

G

Builds the adjacency list information by parsing the given image along the skeleton.
Performs a search for the BMAT by testing for maximal radius bitangent circles that have no part outside of the object.
Copies the given image into a new image, and performs the distance map operation on the new image.
A toggle whether to include the original image in the eyecandy presentation image or not.
A toggle whether to include the lighting correction surface in the eye candy.
Parses the given image for nodes.
Computes the envelope of the Blum medial axis maximal discs.
generatePruning() - method in class vnt.Endpoint_Prune
Computes the pruned skeleton onto a newly created image.
Traces the ridges of a given distance map.
Segments the image via the following process: 1) Find Edges - a standard call is performed This creates a lot of noise in the background and within the vasculature.
"Grows" the low threshold into the high threshold.
Performs the Skeletonization (thinning) algorithm on the distance map ridge skeleton.
Performs the thinning algorithm on the segmented image.
Performs the fancy pants Voronoi/Delaunay algorithm stuff that Paul Chew, chew@cs.cornell.edu wrote.
Looks at the 5x5 area centered on the given pixel.
Looks at the 7x7 area centered on the given pixel.
getAdjacency() - method in class vnt.Node
A standard accessor to the adjacency list variable.
getAdjacencySize() - method in class vnt.Node
Returns the number of nodes in the adjacency list.
getAfter() - method in class vnt.Node_LinkedList
Accessor to the linked node after this one.
getAlphaChannel(int) - static method in class vnt.VascularNetworkToolkit
Extracts and returns the alpha transparency channel from a 4 byte ARGB color.
getBefore() - method in class vnt.Node_LinkedList
Accessor to the linked node before this one.
getBlueChannel(int) - static method in class vnt.VascularNetworkToolkit
Extracts and returns the blue color channel from a 4 byte ARGB color.
getColor() - method in class vnt.Coordinate
Accessor for color variable.
Returns the color of an 8-neighbor to the given coordinate pixel.
Grabs the grayscale color of the pixel requested from the local member pixel array.
Analyzes the histograph for the most common colors.
Searches the pixel[][] array for the darkest (smallest) non-BLACK (assumed 0) color.
Gets the width and heigh information of the given image.
Calculates the area of a 4-connected enclosed mesh.
Initializes the plug-in by storing it's imageplus information.
getGreenChannel(int) - static method in class vnt.VascularNetworkToolkit
Extracts and returns the green color channel from a 4 byte ARGB color.
Returns the high (overestimate) threshold.
Performs a least-squares regression.
Looks at the 8-neighborhood of a pixel.
Attempts to load the local settings information from the text file 'settings.txt' in the given folder.
Calculates and returns a low (underestimate) threshold.
getMu() - method in class Otsu.GrayLevelClass
getNode() - method in class vnt.Node_LinkedList
Accessor to the node variable.
getOmega() - method in class Otsu.GrayLevelClass
getRadius() - method in class vnt.Node
Accessor for radius variable.
getRedChannel(int) - static method in class vnt.VascularNetworkToolkit
Extracts and returns the red color channel from a 4 byte ARGB color.
getThreshold() - method in class Otsu.GrayLevelClass
Looks at the 8-neighborhood of a pixel.
getX() - method in class vnt.Coordinate
Accessor for X variable.
getX() - method in class vnt.Node
Accessor for X variable.
getY() - method in class vnt.Coordinate
Accessor for Y variable.
getY() - method in class vnt.Node
Accessor for Y variable.
GRAY - static field in class vnt.VascularNetworkToolkit
The integer value ImageJ associates with the middle grayscale color value gray.
This class implements a class of pixels with basic statistical functions.
GREEN - static field in class vnt.VascularNetworkToolkit
The integer ARGB color value ImageJ associates with the color GREEN.